Thursday February 4th, 2016 at 1:00 p.m. Dr. Salah Sharieh, Senior Technical Innovator, will be presenting “Agile Methodologies in the Enterprise”. Speaker: Salah Sharieh Senior Technical Innovator Doctor of Philosophy, McMaster University Day & Time: Thursday, February 4, 2016 1:00 p.m. – 2:00 p.m. Location: Room LG04, George Vari Engineering and Computing Centre Ryerson University, Toronto, M5B 1Z4 Contact: Dr. Maryam Davoudpour Abstract: The only constant is change and technology is changing very fast. To build an enterprise software is inherently complex and lengthy with a need for flexibility to adjust to the changing needs of customers and market conditions. Agile methodologies are often presented as the solution for these problems. Adopting a new concept often proves harder than it seems at first but having the right people with the right tools to support the change can make it easier. Introducing Agile into large organization has advantages and disadvantages such as accelerating delivery and shortening the feedback cycle. On the other hand, these types of methodologies have higher dependency on people skills rather than processes which makes it harder to achieve the desired value. After further analysis, it appears that only some parts of agile methodologies work well. In this topic, we will talk about the challenges that CIOs face with adapting agile methods and what can be done to increase the likely hood of useful adoption and implementation in large organizations. In addition, we will talk about vendors’ role in agile projects and how they might contribute to the failure or the success of a project. Finally, we will compare and contrast Agile with iterative approaches. Biography: Dr. Salah Sharieh is a Senior Technical Innovator with extensive experience in business and technology. He has developed his business savvy through working with Fortune 500 companies. Salah also holds the degree of Doctor of Philosophy from McMaster University. He has more than twenty peer reviewed publications and has contributed to several books. He also is a technical reviewer for several journals and conferences and is a member of the CIO association of Canada. Recently Salah led the National Occupation Standards for Cyber Security. In the last 20 years, Salah Sharieh founded several companies, some of which were later acquired by larger organizations. He has delivered high profile solutions and provided vision and leadership to several industries including financial, telecommunication, manufacturing, and the public sector. Under Salah’s leadership, start-up companies evolved from concept to companies providing products and solutions for businesses across Canada, the United States, and Europe.
Events
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Thursday February 11th, 2016 at 1:00 p.m. Michael Hoffman, Principal Investigator at Princess Margaret Cancer Centre and Assistant Professor in the Departments of Medical Biophysics, University of Toronto, will be presenting “Semi-automated genome annotation and an expanded epigenetic alphabet”. Speaker: Michael Hoffman Principal Investigator at Princess Margaret Cancer Centre Assistant Professor in the Departments of Medical Biophysics, University of Toronto Day & Time: Thursday, February 11, 2016 1:00 p.m. – 2:00 p.m. Location: Room LG04, George Vari Engineering and Computing Centre Ryerson University, Toronto, M5B 1Z4 Please check before the seminar Contact: llivi@scs.ryerson.ca Abstract: First, we will discuss Segway, an integrative method to identify patterns from multiple functional genomics experiments, discovering joint patterns across different assay types. We apply Segway to ENCODE ChIP-seq andDNase-seq data and identify patterns associated with transcription start sites, gene ends, enhancers, CTCF elements, and repressed regions. Segway yields a model which elucidates the relationship between assay observations and functional elements in the genome. Second, we will discuss a new method to discover transcription factor motifs and identify transcription factor binding sites in DNA with covalent modifications such as methylation. Just as transcription factors distinguish one standard nucleobase from another, they also distinguish unmodified and modified bases. To represent the modified bases in a sequence, we replace cytosine (C) with symbols for 5-methylcytosine (5mC), 5-hydroxylmethylcytosine (5hmC), 5-formylcytosine (5fC). Similarly, we adapted the well-established position weight matrix model of transcription factor binding affinity to an expanded alphabet. We created an expanded-alphabet genome sequence using genome-wide maps of 5mC, 5hmC, and 5fC in mouse embryonic stem cells. Using this sequence and expanded-alphabet position weight matrixes, we reproduced various known methylation binding preferences, including the preference of ZFP57 and C/EBPβ for methylated motifs and the preference of c-Myc for unmethylated motifs. Using these known binding preferences to tune model parameters enables discovery of novel modified motifs. Biography: Michael Hoffman is a principal investigator at the Princess Margaret Cancer Centre and Assistant Professor in the Departments of Medical Biophysics and Computer Science, University of Toronto. He researches the application of machine learning techniques to epigenomic data. He previously led the National Institutes of Health ENCODE Project’s large-scale integration task group while at the University of Washington. He has a PhD from the University of Cambridge, where he conducted computational genomics studies at the European Bioinformatics Institute. He also has a B.S. in Biochemistry and a B.A. in the Plan II Honors Program at The University of Texas at Austin. He was named a Genome Technology Young Investigator and has received several awards for his academic work, including a NIH K99/R00 Pathway to Independence Award. |
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Friday February 26th, 2016 at 11:10 a.m. Dr. Boris Murmann, Associate Professor at Stanford University, will be presenting “Systematic Design of Analog Circuits Using Pre-Computed Lookup Tables”. Speaker: Dr. Boris Murmann Associate Professor, Electrical Engineering, Stanford University IEEE Fellow, and Program Vice-Chair at ISSCC 2016 Day & Time: Friday, February 26th, 2016 11:10 a.m. – 12:40 p.m. Location: BA1210, Bahen Centre for Information Technology, University of Toronto 40 St George St, Toronto, ON M5S 2E4 Contact: Dustin Dunwell Abstract: The majority of textbook material on analog circuit design is based on the square-law model for MOS transistors. While this model remains useful for teaching, it has become too inaccurate for design in nanoscale CMOS. In circuit simulators, this problem has been solved using complex models equations with hundreds of parameters. Since these descriptions are impractical for manual use, designers tend to shy away from hand-analysis-based optimization and resort to a design style built on iterative and time-consuming “tweaking” in a simulator. This tutorial presents a systematic design methodology that bridges the gap between simulation, hand analysis and script-based optimization. The approach hinges upon Spice-generated look-up tables containing the transistor’s equivalent model parameters (gm, gds, etc.) across a multi-dimensional sweep of the terminal voltages. We interpret and organize these data based on the transistor’s inversion level, employing gm/ID as a proxy and key parameter for design. This width-independent metric captures a device’s efficiency in translating bias current to transconductance and spans nearly the same range in all modern CMOS processes (~3…30 S/A). When combined with other width-independent figures of merit (gm/Cgg, gm/gds, etc.) thinking in terms of gm/ID (rather than gate overdrive) allows us to study the tradeoffs between bandwidth, noise, distortion and power dissipation in a normalized space. The final bias currents and device sizes follow from a straightforward denormalization step using the current density ID/W. Since this entire flow is driven by Spice-generated data, we maintain close agreement between the desired specs and the circuit’s simulated performance. We will detail the inner workings of this approach, and showcase its capabilities using a variety of practical examples. Biography: Boris Murmann joined Stanford University in 2004, where he currently serves as an Associate Professor of Electrical Engineering. He received the Ph.D. degree in electrical engineering from the University of California at Berkeley in 2003. From 1994 to 1997, he was with Neutron Microelectronics, Germany, where he developed low-power and smart-power ASICs in automotive CMOS technology. Dr. Murmann’s research interests are in the area of mixed-signal integrated circuit design, with special emphasis on data converters and sensor interfaces. In 2008, he was a co-recipient of the Best Student Paper Award at the VLSI Circuits Symposium in 2008 and a recipient of the Best Invited Paper Award at the IEEE Custom Integrated Circuits Conference (CICC). He received the Agilent Early Career Professor Award in 2009 and the Friedrich Wilhelm Bessel Research Award in 2012. He has served as an Associate Editor of the IEEE Journal of Solid-State Circuits and as the Data Converter Subcommittee Chair of the IEEE International Solid-State Circuits Conference (ISSCC). He currently serves as the program vice-chair for the ISSCC 2016. He is a Fellow of the IEEE. |
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Monday February 29th, 2016 at 3:10 p.m. Professor Willie Ng, Dept. of Electrical Engineering, University of Southern California, will be presenting “Photonics for Microwave Systems and Ultra-Wideband Signal Processing”. Speaker: Professor Willie Ng Dept. of Electrical Engineering, University of Southern California IEEE Fellow Day & Time: Monday, February 29th, 2016 3:10 p.m. – 4:00 p.m. Location: GB 120, Galbraith Building, University of Toronto 35 St George St, Toronto, ON M5S 1A4 **Refreshments will be served** Contact: Junho Jeong Abstract: This seminar will describe the development and application of photonics technology in microwave antenna systems and ultra-wideband signal processing. It will cover our recent work on the characterization of high frequency modulators and mode-locked lasers, photonic-assisted analog-to-digital conversion, as well as RF-photonic filtering. The seminar will also describe how the broadband capabilities of photonics and wavelength division multiplexed (WDM) technologies can be utilized for high dynamic range antenna remoting and true-time-delay beamforming that cover multiple microwave bands. Biography: Dr. Willie W. Ng is currently a Research Professor ofl Engineering at the University of Southern California (USC). Prior to joining USC in 2013, he spent close to three decades at HRL Laboratories, Malibu, CA, where he was a Principal Research Scientist, Program Manager and Department Manager. Under DARPA and U.S. Air Force sponsorships, he led HRL teams that demonstrated a variety of photonic devices/subsystems designed for microwave antenna systems and ultra-wideband signal processing, including RF-photonic filtering and photonics-assisted analog-to-digital conversion. He has given many invited talks in IEEE/OSA Conferences and DARPA Symposiums, and is the author and co-author of over 100 journal articles and conference papers. He holds 26 U.S. patents in the area of photonics technology, with many pending. Cited for pioneering contributions to microwave photonics, he was one of six individuals selected to receive the Excellence in Technology Award in 2005 from the Raytheon Company. Prior to HRL, he was a Member of the Technical Staff at the Rockwell Science Center, Thousand Oaks, Calif., where he developed GaInAsP/InP buried heterostructure lasers and power converters. He received his B.S. degree in Electrical Engineering from Case Western Reserve University (Cleveland, Ohio), and his M.S. and Ph.D. degrees in Electrical Engineering from the California Institute of Technology (Pasadena, Calif.) under the guidance of Prof. A. Yariv. His thesis work was on the demonstration of GaAlAs/GaAs Distributed Bragg Reflector lasers and Bragg waveguides. He is a fellow of the IEEE, and serves on the 2013-2015 CLEO (Conference on Lasers and Electro-Optics) Technical Committee. |
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